Pracownicy

dr Anna Karnkowska - adiunkt


Zakład Filogenetyki Molekularnej i Ewolucji, CNBCh UW
ul. Żwirki i Wigury 101, 02-089 Warszawa
tel. 22 55 266 41    ankarn@biol.uw.edu.pl

Curriculum vitae


Problematyka badawcza

  • Ewolucja mikroorganizmów eukariotycznych
  • Ewolucja chloroplastów i mitochondriów
  • Transkryptomika i genomika mikroorganizmów eukariotycznych
  • Taksonomia i różnorodność autotroficznych euglenin (więcej informacji tutaj)

Dydaktyka


Publikacje

  • Strassert J.F.H., Karnkowska A., Hehenberger E., del Campo J., Kolisko M., Okamoto N., Burki F., Janouškovec J., Poirier C., Leonard G., Hallam S.J., Richards T.A., Worden A.Z., Santoro A.E., Keeling P.J. (2017). Single cell genomics shows uncultured Marine Alveolates (MALVs) represent multiple independent lineages in early dinoflagellate evolution. ISME Journal, in press.
  • Boscaro V., James E.R., Fiorito R., Hehenberger E., Karnkowska A., del Campo J., Kolisko M., Irwin N.A.T., Mathur V., Scheffrahn R.H. & Keeling P.J. (2017). Molecular characterization and phylogeny of four new Trichonympha (Parabasalia, Trichonymphea) species from lower termite hindguts. International Journal of Systematic and Evolutionary Microbiology 67: 3570-3575.
  • Leander B.S., Lax G., Karnkowska A., Simpson A.G.B. (2017). Euglenida. In: Archibald J.M., Simpson A.G.B. & Slamovits C. (eds) Handbook of the Protists (2nd edition of the Handbook of Protoctista by Margulis et al.). Springer-Verlag, Vien pp. 1047-1088.
  • Zakryś B., Milanowski R., Karnkowska A. (2017). Evolutionary origin of Euglena. In: Schwartzbach S., Shigeoka S. (eds) Euglena: Biochemistry, Cell and Molecular Biology. Adv Exp Med Biol 979: 3-17.
  • Łukomska-Kowalczyk M., Karnkowska A., Krupska M., Milanowski R., Zakryś B. (2016). DNA barcoding in autotrophic euglenids: evaluation of COI and 18s rDNA. J Phycol 52(6): 951-960.
  • Klinger CM., Karnkowska A., Herman EK., Hampl V. and Dacks JB. (2016). Phylogeny and Evolution. In: Walochnik J. and Duchene M. (Eds.) Molecular Parasitology - Protozoan Parasites and their Molecules. Springer-Verlag, Wien pp. 383-408.
  • Novák L., Zubáčová Z., Karnkowska A., Kolisko M., Hroudová M., Stairs CW., Simpson AGB., Keeling PJ., Roger AJ., Čepička I., Hampl V. (2016). Arginine deiminase pathway enzymes: evolutionary history in metamonads and other eukaryotes. BMC Evol Biol 16:197 [pobierz plik pdf].
  • Karnkowska A. and Hampl V. (2016). The curious case of vanishing mitochondria. Microbial Cell 3(10): 361-364.
  • Karnkowska A., Vacek V., Zubacova Z., Treitli SC., Petrzelkova R., Eme L., Novak L., Zarsky V., Barlow LD., Herman EK., Soukal P., Hroudova M., Dolezal P., Stairs CW., Roger AJ., Elias M, Dacks JB., Vlcek C. and Hampl V. (2016). A Eukaryote without a Mitochondrial Organelle. Current Biology. 26(10): 1274-1284. [pobierz plik pdf].
  • Milanowski R., Gumińska N., Karnkowska A., Ishikawa T., Zakryś B. (2016). Intermediate introns in nuclear genes of euglenids – are they a distinct type? BMC Evol Biol 16:49 [pobierz plik pdf].
  • Łukomska-Kowalczyk M., Karnkowska A., Milanowski R., Łach Ł., Zakryś B. (2015). Delimiting species in the Phacus longicauda complex (Euglenida) through morphological and molecular analyses. J Phycol 51: 1147-57.
  • Karnkowska A., Bennett M.S., Watza D., Kim J.I., Zakryś B., Triemer R.E. (2015). Phylogenetic relationships and morphological character evolution of photosynthetic euglenids (Excavata) inferred from taxon-rich analyses of five genes. J Eukaryot Microbiol 62: 362-373.
  • Bukowska A., Bielczyńska A., Karnkowska A., Chróst R and Jasser I. (2014). Molecular (PCR-DGGE) versus morphological approach: analysis of taxonomic composition of potentially toxic cyanobacteria in freshwater lakes. Aquat Biosyst 10: 2 [pobierz plik pdf].
  • Milanowski R., Karnkowska A., Ishikawa T., Zakryś B. (2014). Distribution of conventional and non-conventional introns in tubulin (alpha and beta) genes of euglenids. Mol Biol Evol 31: 584-593 [pobierz plik pdf].
  • Zakryś B., Karnkowska-Ishikawa A., Łukomska-Kowalczyk M., Milanowski R. (2013). New photosynthetic euglenoid isolated in Poland: Euglenaria clepsydroides sp. nova (Euglenea). Eur J Phycol 48: 260-267.
  • Karnkowska-Ishikawa A., Milanowski R., Triemer R.E., Zakryś B. (2013). A rediscription of morphologically similar species from the genus Euglena: E. laciniata, E. sanguinea. E. sociabilis and E. splendens. J Phycol 49: 616-26.
  • Jasser I., Karnkowska-Ishikawa A., Chróst R.J. (2013). Acid-tolerant picocyanobacteria isolated from humic lakes. Hydrobiologia 707: 209-18.
  • Karnkowska-Ishikawa A., Milanowski R., Triemer R.E., Zakryś B. (2012). Taxonomic revisions of morphologically similar species from two euglenoid genera: Euglena (E. granulata and E. velata) and Euglenaria (Eu. anabaena, Eu. caudata, Eu. clavata). J Phycol 48: 729-39.
  • Karnkowska-Ishikawa A., Milanowski R. and Zakryś B. (2011). The species Euglena deses (Euglenaceae) revisited: new morphological and molecular data. J Phycol 47: 653-61.
  • Jasser I., Królicka A., Karnkowska-Ishikawa A. (2011). A novel phylogenetic clade of picocyanobacteria from the Mazurian lakes (Poland) reflects the early ontogeny of glacial lakes. FEMS Microbiol Ecol 75(1): 89-98.
  • Linton E.W., Karnkowska-Ishikawa A., Kim J.I., Shin W., Bennett M., Kwiatowski J., Zakryś B. & Triemer E.R. (2010). Reconstructing Euglenoid Evolutionary Relationships using Three Genes: Nuclear SSU and LSU, and Chloroplast 16S rDNA Sequences and the description of Euglenaria gen. nov. (Euglenophyta). Protist 161: 603-619.
  • Jasser I., Karnkowska-Ishikawa A., Kozłowska E., Królicka A., Łukomska-Kowalczyk M. (2010). Composition of picocyanobacteria community in The Great Mazurian Lakes: isolation of phycoerythrin-rich and phycocyanin-rich ecotypes from the system - comparison of two methods. Pol. J Microbiol 59 (1): 21-31.
  • Karnkowska-Ishikawa A., Milanowski R., Kwiatowski J. & Zakryś B. (2010). Taxonomy of the Phacus oscilans and its close relatives - balancing morphological and molecular features. J Phycol 46: 172-182.
  • Kosmala S., Karnkowska-Ishikawa A., Milanowski R., Kwiatowski J. & B. Zakryś (2009). Phylogeny and Systematics of Euglena (Euglenaceae) species with axial, stellate chloroplasts based on morphological and molecular data - new taxa, emended diagnoses and epityfication. J Phycol 45: 464-481.
  • Kosmala S., Karnkowska A., Milanowski R., Kwiatowski J. & B. Zakryś (2005). The phylogenetic and taxonomic position of Lepocinclis fusca comb. nova (=Euglena fusca) (Euglenaceae). Morphological and molecular justification. J Phycol 41: 258-1267.